toxtree.data

Class DecisionMethodsDataModule

java.lang.Object

java.util.Observable

toxtree.data.DataModule

toxtree.data.DecisionMethodsDataModule

All Implemented Interfaces:

Serializable, Observer

Direct Known Subclasses:

ToxForestDataModule, ToxTreeModule

public class DecisionMethodsDataModule
extends DataModule

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
protected IDecisionMethodEditor	editor
protected IDecisionMethodsList	methods
protected IDecisionMethod	rules
protected IDecisionResult	treeResult

Fields inherited from class toxtree.data.DataModule

batch, dataContainer, jcpDialog, jcpModel, logger, useDatabase

Constructor Summary

Constructors

Constructor and Description
DecisionMethodsDataModule()
DecisionMethodsDataModule(JFrame frame, File inputFile, DecisionMethodsList methods)

Method Summary

Modifier and Type	Method and Description
void	addResultPropertyChangeListener(PropertyChangeListener l)
void	addRulesPropertyChangeListener(PropertyChangeListener l)
void	classify()
ConfusionMatrix	classifyAll()
void	clearFilters()
void	clearResults()
protected DataContainer	createDataContainer(File inputFile)
void	explain()
ActionList	getActions()
IDecisionMethodsList	getMethods()
IDecisionMethod	getRules()
IDecisionMethod	getSelectedRules()
IDecisionResult	getTreeResult()
int	gotoRecord(String record)
int	lookup(String field, Object value)
void	selectFilter(Component parentComponent)
void	setMethods(IDecisionMethodsList methods)
void	setRules(IDecisionMethod rules)
void	update(Observable arg0, Object arg1)
void	viewMethod(IDecisionMethod method, boolean editable)
void	viewMethod(int methodIndex, boolean editable)

Methods inherited from class toxtree.data.DataModule

batch, editMolecule, getDataContainer, showMetabolites

Methods inherited from class java.util.Observable

addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

methods

protected IDecisionMethodsList methods

rules

protected IDecisionMethod rules

treeResult

protected IDecisionResult treeResult

editor

protected transient IDecisionMethodEditor editor

Constructor Detail

DecisionMethodsDataModule

public DecisionMethodsDataModule()

DecisionMethodsDataModule

public DecisionMethodsDataModule(JFrame frame,
                                 File inputFile,
                                 DecisionMethodsList methods)

Method Detail

getActions

public ActionList getActions()

Specified by:

getActions in class DataModule

update

public void update(Observable arg0,
                   Object arg1)

createDataContainer

protected DataContainer createDataContainer(File inputFile)

Specified by:

createDataContainer in class DataModule

getMethods

public IDecisionMethodsList getMethods()

setMethods

public void setMethods(IDecisionMethodsList methods)

getSelectedRules

public IDecisionMethod getSelectedRules()

getRules

public IDecisionMethod getRules()

setRules

public void setRules(IDecisionMethod rules)

getTreeResult

public IDecisionResult getTreeResult()

viewMethod

public void viewMethod(IDecisionMethod method,
                       boolean editable)
                throws DecisionMethodException

Specified by:

viewMethod in class DataModule

Throws:

DecisionMethodException

viewMethod

public void viewMethod(int methodIndex,
                       boolean editable)
                throws DecisionMethodException

Throws:

DecisionMethodException

clearResults

public void clearResults()

clearFilters

public void clearFilters()
                  throws FilterException

Throws:

FilterException

selectFilter

public void selectFilter(Component parentComponent)
                  throws FilterException

Throws:

FilterException

lookup

public int lookup(String field,
                  Object value)

gotoRecord

public int gotoRecord(String record)
               throws Exception

Throws:

Exception

classifyAll

public ConfusionMatrix classifyAll()

classify

public void classify()

addRulesPropertyChangeListener

public void addRulesPropertyChangeListener(PropertyChangeListener l)

addResultPropertyChangeListener

public void addResultPropertyChangeListener(PropertyChangeListener l)

explain

public void explain()