toxtree.plugins.kroes.rules

Class MyOrderQueryBond

java.lang.Object

org.openscience.cdk.isomorphism.matchers.QueryChemObject

org.openscience.cdk.isomorphism.matchers.QueryBond

org.openscience.cdk.isomorphism.matchers.OrderQueryBond

toxtree.plugins.kroes.rules.MyOrderQueryBond

All Implemented Interfaces:

Cloneable, org.openscience.cdk.interfaces.IBond, org.openscience.cdk.interfaces.ICDKObject, org.openscience.cdk.interfaces.IChemObject, org.openscience.cdk.interfaces.IElectronContainer, org.openscience.cdk.isomorphism.matchers.IQueryBond

public class MyOrderQueryBond
extends org.openscience.cdk.isomorphism.matchers.OrderQueryBond

Nested Class Summary

Nested classes/interfaces inherited from interface org.openscience.cdk.interfaces.IBond

org.openscience.cdk.interfaces.IBond.Order, org.openscience.cdk.interfaces.IBond.Stereo

Field Summary

Fields inherited from class org.openscience.cdk.isomorphism.matchers.QueryBond

atomCount, atoms, electronCount, order, stereo

Constructor Summary

Constructors

Constructor and Description
MyOrderQueryBond(org.openscience.cdk.interfaces.IChemObjectBuilder builder)
MyOrderQueryBond(org.openscience.cdk.isomorphism.matchers.IQueryAtom atom1, org.openscience.cdk.isomorphism.matchers.IQueryAtom atom2, org.openscience.cdk.interfaces.IBond.Order order, org.openscience.cdk.interfaces.IChemObjectBuilder builder)

Method Summary

Modifier and Type	Method and Description
boolean	matches(org.openscience.cdk.interfaces.IBond bond)

Methods inherited from class org.openscience.cdk.isomorphism.matchers.OrderQueryBond

setAtomAt, setAtoms

Methods inherited from class org.openscience.cdk.isomorphism.matchers.QueryBond

atoms, clone, compare, contains, get2DCenter, get3DCenter, getAtom, getAtomCount, getConnectedAtom, getConnectedAtoms, getElectronCount, getOrder, getStereo, isAromatic, isConnectedTo, isInRing, setAtom, setElectronCount, setIsAromatic, setIsInRing, setOrder, setStereo, toString

Methods inherited from class org.openscience.cdk.isomorphism.matchers.QueryChemObject

addListener, addProperties, getBuilder, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, matches, notifyChanged, notifyChanged, removeListener, removeProperty, setFlag, setFlags, setID, setNotification, setProperties, setProperty

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.openscience.cdk.interfaces.IBond

atoms, clone, compare, contains, get2DCenter, get3DCenter, getAtom, getAtomCount, getConnectedAtom, getConnectedAtoms, getOrder, getStereo, isAromatic, isConnectedTo, isInRing, setAtom, setIsAromatic, setIsInRing, setOrder, setStereo

Methods inherited from interface org.openscience.cdk.interfaces.IElectronContainer

getElectronCount, setElectronCount

Methods inherited from interface org.openscience.cdk.interfaces.IChemObject

addListener, addProperties, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, notifyChanged, notifyChanged, removeListener, removeProperty, setFlag, setFlags, setID, setNotification, setProperties, setProperty, toString

Methods inherited from interface org.openscience.cdk.interfaces.ICDKObject

getBuilder

Constructor Detail

MyOrderQueryBond

public MyOrderQueryBond(org.openscience.cdk.interfaces.IChemObjectBuilder builder)

MyOrderQueryBond

public MyOrderQueryBond(org.openscience.cdk.isomorphism.matchers.IQueryAtom atom1,
                        org.openscience.cdk.isomorphism.matchers.IQueryAtom atom2,
                        org.openscience.cdk.interfaces.IBond.Order order,
                        org.openscience.cdk.interfaces.IChemObjectBuilder builder)

Method Detail

matches

public boolean matches(org.openscience.cdk.interfaces.IBond bond)

Specified by:

matches in interface org.openscience.cdk.isomorphism.matchers.IQueryBond

Overrides:

matches in class org.openscience.cdk.isomorphism.matchers.OrderQueryBond