verhaar.query

Class AromaticQueryBond

java.lang.Object

org.openscience.cdk.isomorphism.matchers.QueryChemObject

org.openscience.cdk.isomorphism.matchers.QueryBond

org.openscience.cdk.isomorphism.matchers.smarts.SMARTSBond

org.openscience.cdk.isomorphism.matchers.smarts.AromaticQueryBond

verhaar.query.AromaticQueryBond

All Implemented Interfaces:

Cloneable, org.openscience.cdk.interfaces.IBond, org.openscience.cdk.interfaces.ICDKObject, org.openscience.cdk.interfaces.IChemObject, org.openscience.cdk.interfaces.IElectronContainer, org.openscience.cdk.isomorphism.matchers.IQueryBond

public class AromaticQueryBond
extends org.openscience.cdk.isomorphism.matchers.smarts.AromaticQueryBond

A fix until AromaticQueryBond is fixed

Author:

Nina Jeliazkova Modified 2005-10-30

Nested Class Summary

Nested classes/interfaces inherited from interface org.openscience.cdk.interfaces.IBond

org.openscience.cdk.interfaces.IBond.Order, org.openscience.cdk.interfaces.IBond.Stereo

Field Summary

Fields inherited from class org.openscience.cdk.isomorphism.matchers.QueryBond

atomCount, atoms, electronCount, order, stereo

Constructor Summary

Constructors

Constructor and Description
AromaticQueryBond(org.openscience.cdk.interfaces.IChemObjectBuilder builder)
AromaticQueryBond(org.openscience.cdk.isomorphism.matchers.IQueryAtom atom1, org.openscience.cdk.isomorphism.matchers.IQueryAtom atom2, org.openscience.cdk.interfaces.IChemObjectBuilder builder)

Method Summary

Modifier and Type	Method and Description
boolean	matches(org.openscience.cdk.interfaces.IBond bond)

Methods inherited from class org.openscience.cdk.isomorphism.matchers.smarts.AromaticQueryBond

toString

Methods inherited from class org.openscience.cdk.isomorphism.matchers.QueryBond

atoms, clone, compare, contains, get2DCenter, get3DCenter, getAtom, getAtomCount, getConnectedAtom, getConnectedAtoms, getElectronCount, getOrder, getStereo, isAromatic, isConnectedTo, isInRing, setAtom, setAtoms, setElectronCount, setIsAromatic, setIsInRing, setOrder, setStereo

Methods inherited from class org.openscience.cdk.isomorphism.matchers.QueryChemObject

addListener, addProperties, getBuilder, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, matches, notifyChanged, notifyChanged, removeListener, removeProperty, setFlag, setFlags, setID, setNotification, setProperties, setProperty

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface org.openscience.cdk.interfaces.IBond

atoms, clone, compare, contains, get2DCenter, get3DCenter, getAtom, getAtomCount, getConnectedAtom, getConnectedAtoms, getOrder, getStereo, isAromatic, isConnectedTo, isInRing, setAtom, setAtoms, setIsAromatic, setIsInRing, setOrder, setStereo

Methods inherited from interface org.openscience.cdk.interfaces.IElectronContainer

getElectronCount, setElectronCount

Methods inherited from interface org.openscience.cdk.interfaces.IChemObject

addListener, addProperties, getFlag, getFlags, getFlagValue, getID, getListenerCount, getNotification, getProperties, getProperty, getProperty, notifyChanged, notifyChanged, removeListener, removeProperty, setFlag, setFlags, setID, setNotification, setProperties, setProperty

Methods inherited from interface org.openscience.cdk.interfaces.ICDKObject

getBuilder

Constructor Detail

AromaticQueryBond

public AromaticQueryBond(org.openscience.cdk.interfaces.IChemObjectBuilder builder)

AromaticQueryBond

public AromaticQueryBond(org.openscience.cdk.isomorphism.matchers.IQueryAtom atom1,
                         org.openscience.cdk.isomorphism.matchers.IQueryAtom atom2,
                         org.openscience.cdk.interfaces.IChemObjectBuilder builder)

Parameters:

atom1 -

atom2 -

order -

Method Detail

matches

public boolean matches(org.openscience.cdk.interfaces.IBond bond)

Specified by:

matches in interface org.openscience.cdk.isomorphism.matchers.IQueryBond

Overrides:

matches in class org.openscience.cdk.isomorphism.matchers.smarts.AromaticQueryBond