public class Rule24 extends RuleSMARTSSubstructureAmbit
| Modifier and Type | Field and Description |
|---|---|
protected String[][] |
smarts |
containsAllSubstructures, final_and_patch, smartsPatternschanges, editable, ERR_STRUCTURENOTPREPROCESSED, examples, explanation, id, logger, MSG_NO, MSG_YES, no, residueIDHidden, titlexmltag_CATEGORIES, xmltag_CATEGORY, xmltag_CATEGORYTHRESHOLD, xmltag_CLASS, xmltag_EXPLANATION, xmltag_ID, xmltag_METHOD, xmltag_METHODPARAMETER, xmltag_METHODS, xmltag_NAME, xmltag_RULE, xmltag_RULEEXAMPLE, xmltag_RULES, xmltag_TREEROOT| Constructor and Description |
|---|
Rule24() |
| Modifier and Type | Method and Description |
|---|---|
boolean |
isImplemented() |
boolean |
verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol)
This is the core of a
IDecisionRule behaviour. |
boolean |
verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol,
org.openscience.cdk.interfaces.IAtomContainer selected) |
createSmartsPattern, getObjectToVerify, hasRingsToProcessaddSubstructure, addSubstructure, addSubstructure, clearSubstructures, containsAllSubstructures, deleteSubstructure, equals, getImplementationDetails, getSelector, getSmartsPatterns, getSubstructure, initSingleSMARTS, isAPossibleHit, removeSingleSMARTS, setContainsAllSubstructures, setSmartsPatterns, setSubstructure, setSubstructureaddPropertyChangeListener, clearFlags, clone, createRule, fromXML, getEditor, getExampleMolecule, getExamples, getExplanation, getID, getNum, getTitle, hideResiduesID, isEditable, isResidueIDHidden, log, log, log, makeMolecule, removePropertyChangeListener, setEditable, setExampleMolecule, setExamples, setExplanation, setID, setNum, setTitle, toShallowXML, toString, toXMLaddObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChangedprotected String[][] smarts
public boolean verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol)
throws DecisionMethodException
IDecisionRuleIDecisionRule behaviour. The method returns true
if the answer of the rule is YES for the analyzed molecule org.openscience.cdk.interfaces.AtomContainer and FALSE
if the answer of the rule is NO for the analyzed molecule org.openscience.cdk.interfaces.AtomContainer??verifyRule in interface IDecisionRuleverifyRule in class AbstractRuleSmartSubstructure<org.openscience.cdk.interfaces.IAtomContainer>mol - org.openscience.cdk.interfaces.AtomContainerDecisionMethodExceptionpublic boolean verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol,
org.openscience.cdk.interfaces.IAtomContainer selected)
throws DecisionMethodException
verifyRule in class AbstractRuleSmartSubstructure<org.openscience.cdk.interfaces.IAtomContainer>DecisionMethodExceptionpublic boolean isImplemented()
isImplemented in interface IDecisionRuleisImplemented in class AbstractRuleSmartSubstructure<org.openscience.cdk.interfaces.IAtomContainer>Copyright © 2004–2018 Ideaconsult Ltd. All rights reserved.