Uses of Package
toxTree.query

Packages that use toxTree.query

Package	Description
mic.rules
mutant.rules
sicret.rules	The package contains implementations of IDecisionRule rules for SicretRules decision tree.
toxTree.query	Various classes
toxTree.tree.cramer	Class CramerRules is the implementation of Cramer rules [Cramer et al,78].
toxTree.tree.rules	The package contains several generic implementations of IDecisionRule rules
toxtree.ui.tree	User interface for viewing and editing a decision tree IDecisionMethod
verhaar.query
verhaar.rules	The package contains implementations of IDecisionRule rules for VerhaarScheme decision tree.

Classes in toxTree.query used by mic.rules

Class and Description
QueryAtomContainers TODO add description

Classes in toxTree.query used by mutant.rules

Class and Description
SimpleReactions Handles hydrolysis and couple of metabolic reactions necessary to implement Cramer rules Intended to be a general class to perform reactions on arbitrary molecules ...

Classes in toxTree.query used by sicret.rules

Class and Description
QueryAtomContainers TODO add description

Classes in toxTree.query used by toxTree.query

Class and Description
CHQueryAtom This is to match a hydrocarbon atom in subgraph query Molecule should be preprocessed with FunctionalGroups.markCHn(), otherwise results will not be correct
QueryAtomContainers TODO add description

Classes in toxTree.query used by toxTree.tree.cramer

Class and Description
QueryAtomContainers TODO add description
SimpleReactions Handles hydrolysis and couple of metabolic reactions necessary to implement Cramer rules Intended to be a general class to perform reactions on arbitrary molecules ...

Classes in toxTree.query used by toxTree.tree.rules

Class and Description
QueryAtomContainers TODO add description

Classes in toxTree.query used by toxtree.ui.tree

Class and Description
QueryAtomContainers TODO add description

Classes in toxTree.query used by verhaar.query

Class and Description
FunctionalGroups This class provides static methods for various functional groups In addition there are several static methods to manipulate searching

Classes in toxTree.query used by verhaar.rules

Class and Description
QueryAtomContainers TODO add description