Uses of Package
toxTree.tree.rules.smarts

Packages that use toxTree.tree.rules.smarts

Package	Description
com.molecularnetworks.start.rules
cramer2.rules
eye.rules	The package contains implementations of IDecisionRule rules for SicretRules decision tree.
mic.rules
michaelacceptors.rules
mutant.rules
sicret.rules	The package contains implementations of IDecisionRule rules for SicretRules decision tree.
structurefeatures.rules
toxTree.tree.cramer	Class CramerRules is the implementation of Cramer rules [Cramer et al,78].
toxTree.tree.rules	The package contains several generic implementations of IDecisionRule rules
toxTree.tree.rules.smarts	SMARTS support.
toxtree.plugins.ames.rules
toxtree.plugins.dnabinding.rules
toxtree.plugins.func.rules
toxtree.plugins.kroes.rules
toxtree.plugins.moa.rules
toxtree.plugins.proteinbinding.rules
toxtree.plugins.skinsensitisation.rules
toxtree.tree.cramer3.rules
toxtree.ui.editors
toxtree.ui.tree.rules
verhaar.rules	The package contains implementations of IDecisionRule rules for VerhaarScheme decision tree.

Classes in toxTree.tree.rules.smarts used by com.molecularnetworks.start.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructure For backward compatibility

Classes in toxTree.tree.rules.smarts used by cramer2.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructure For backward compatibility

Classes in toxTree.tree.rules.smarts used by eye.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructure For backward compatibility
RuleSMARTSubstructureCDK An IDecisionRule, making use of CDK SMARTS parser.

Classes in toxTree.tree.rules.smarts used by mic.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructureCDK An IDecisionRule, making use of CDK SMARTS parser.

Classes in toxTree.tree.rules.smarts used by michaelacceptors.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by mutant.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructureCDK An IDecisionRule, making use of CDK SMARTS parser.

Classes in toxTree.tree.rules.smarts used by sicret.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructure For backward compatibility
RuleSMARTSubstructureCDK An IDecisionRule, making use of CDK SMARTS parser.

Classes in toxTree.tree.rules.smarts used by structurefeatures.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxTree.tree.cramer

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxTree.tree.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructureCDK An IDecisionRule, making use of CDK SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxTree.tree.rules.smarts

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.plugins.ames.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSubstructureCDK An IDecisionRule, making use of CDK SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.plugins.dnabinding.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.plugins.func.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.
RuleSMARTSubstructureCDK An IDecisionRule, making use of CDK SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.plugins.kroes.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.plugins.moa.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.plugins.proteinbinding.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.plugins.skinsensitisation.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.tree.cramer3.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.

Classes in toxTree.tree.rules.smarts used by toxtree.ui.editors

Class and Description
AbstractRuleSmartSubstructure

Classes in toxTree.tree.rules.smarts used by toxtree.ui.tree.rules

Class and Description
AbstractRuleSmartSubstructure

Classes in toxTree.tree.rules.smarts used by verhaar.rules

Class and Description
AbstractRuleSmartSubstructure
IRuleSMARTSubstructures
RuleSMARTSSubstructureAmbit An IDecisionRule, making use of Ambit SMARTS parser.