toxtree.data

Class DataContainer

java.lang.Object

java.util.Observable

toxtree.data.DataContainer

Direct Known Subclasses:

DecisionMethodData

public class DataContainer
extends Observable

Field Summary

Fields

Modifier and Type	Field and Description
protected IMoleculesIterator	containers
protected boolean	enabled
protected static Logger	logger
protected boolean	modified
protected File	processingFile

Constructor Summary

Constructors

Constructor and Description
DataContainer()
DataContainer(File inputFile)

Method Summary

Modifier and Type	Method and Description
void	addMolecule()
void	addMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)
void	clearFilters()
void	filter(IDecisionResult treeResult)
Object	first()
int	getCurrentNo()
String	getFileName()
org.openscience.cdk.interfaces.IAtomContainer	getMolecule()
int	getMoleculesCount()
String	getStatus()
int	gotoRecord(int record)
boolean	isEnabled()
boolean	isProcessing()
Object	last()
boolean	loadedFromFile()
int	lookup(String field, Object value)
int	lookup(String field, Object value, boolean silent)
void	newMolecule()
void	newMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)
Object	next()
void	openFile(File input)
Object	prev()
void	saveFile(File output)
void	selectFilter(Component parentComponent)
void	setEnabled(boolean enabled)
void	setMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)
String	toString()

Methods inherited from class java.util.Observable

addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

logger

protected static Logger logger

containers

protected IMoleculesIterator containers

processingFile

protected File processingFile

modified

protected boolean modified

enabled

protected boolean enabled

Constructor Detail

DataContainer

public DataContainer()

DataContainer

public DataContainer(File inputFile)

Method Detail

getMolecule

public org.openscience.cdk.interfaces.IAtomContainer getMolecule()

newMolecule

public void newMolecule()

newMolecule

public void newMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)

addMolecule

public void addMolecule()

addMolecule

public void addMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)

setMolecule

public void setMolecule(org.openscience.cdk.interfaces.IAtomContainer molecule)

clearFilters

public void clearFilters()
                  throws FilterException

Throws:

FilterException

selectFilter

public void selectFilter(Component parentComponent)
                  throws FilterException

Throws:

FilterException

filter

public void filter(IDecisionResult treeResult)
            throws FilterException

Throws:

FilterException

gotoRecord

public int gotoRecord(int record)

lookup

public int lookup(String field,
                  Object value)

lookup

public int lookup(String field,
                  Object value,
                  boolean silent)

openFile

public void openFile(File input)

saveFile

public void saveFile(File output)

getMoleculesCount

public int getMoleculesCount()

getCurrentNo

public int getCurrentNo()

first

public Object first()

last

public Object last()

next

public Object next()

prev

public Object prev()

isProcessing

public boolean isProcessing()

getStatus

public String getStatus()

toString

public String toString()

Overrides:

toString in class Object

loadedFromFile

public boolean loadedFromFile()

getFileName

public String getFileName()

isEnabled

public boolean isEnabled()

setEnabled

public void setEnabled(boolean enabled)